fsl.wrappers.bianca

This module contains wrapper functions for the FSL BIANCA commands.

fsl.wrappers.bianca.bianca(singlefile, querysubjectnum=None, brainmaskfeaturenum=None, **kwargs)

Wrapper function for the FSL bianca command.

fsl.wrappers.bianca.bianca_cluster_stats(bianca_output_map, threshold, min_cluster_size, mask=None)

Wrapper function for the FSL bianca_cluster_stats command.

fsl.wrappers.bianca.bianca_overlap_measures(lesionmask, threshold, manualmask, saveoutput=True)

Wrapper function for the FSL bianca_overlap_measures command.

fsl.wrappers.bianca.bianca_perivent_deep(wmh_map, vent_mask, minclustersize, outputdir, do_stats=1)

Wrapper function for the FSL bianca_perivent_deep command.

fsl.wrappers.bianca.make_bianca_mask(struc, csf_pve, mni2struc, keep_files=False)

Wrapper function for the FSL make_bianca_mask command.